Fig. 4
From: Discovery of optimal cell type classification marker genes from single cell RNA sequencing data
NS-Forest performance evaluated on other human organs (kidney and lung). A Heatmaps of NS-Forest v2.0/v3.9 and v4.0 marker genes for the 75 cell type clusters from human kidney dataset and 61 cell types from human lung L5 subclass dataset. The colors correspond to the normalized median expression level (log2-transformed counts per million) for the marker gene (rows) in a given cell type cluster (columns), with high expression in red/yellow, and low expression in blue/white. The clusters are ordered according to the hierarchical ordering in the dendrogram generated by the scanpy package (scanpy.tl.dendrogram) using default settings. B Comparison of the performance metrics corresponding to the NS-Forest results shown in (A)